Migrate from Matillion to Fivetran

Complete Step-by-Step Guide (2026)

Migrating from Matillion to Fivetran means moving from a visual, warehouse-centric ETL platform to a simple, fully managed cloud ELT solution. Both platforms excel at loading data into cloud data warehouses, but Fivetran's simplicity and breadth of out-of-the-box connectors make it ideal for teams that want zero configuration. This guide covers the migration of Matillion jobs to Fivetran connectors with dbt for transformation.

Why Migrate to Fivetran?

Teams migrate from Matillion to Fivetran for operational simplicity and faster time-to-value. Matillion requires job design effort even for simple cloud ELT scenarios; Fivetran handles common patterns (SaaS → warehouse) with almost zero configuration. If your Matillion use case is 80%+ cloud data warehouse loading, Fivetran offers faster implementation and lower operational overhead. The tradeoff: Matillion's visual job designer and on-premises source support aren't matched by Fivetran. Only migrate if your workloads are primarily cloud ELT.

Step-by-Step Migration Process

1. Audit Matillion Jobs

4-8 hours

Export all active Matillion jobs, groups, and schedules. For each job, document: name, source, target warehouse, transformations, frequency, and any dependencies. Use Matillion's API to extract metadata. Create a spreadsheet categorizing jobs by complexity (simple cloud ELT vs. complex transformation).

⚠️ Watch Out For:

  • Matillion jobs can be organized in groups—ensure you capture all of them
  • Nested jobs and dependencies may not be immediately obvious from the UI

2. Categorize Jobs for Migration

1-2 hours

Sort Matillion jobs into: (1) Cloud source → warehouse (ideal for Fivetran), (2) Cloud source + transformation (Fivetran + dbt), (3) On-premises or complex (keep in Matillion). Most Matillion users will find 70-80% of jobs fall into categories 1-2.

⚠️ Watch Out For:

  • Don't overestimate transformation complexity—some Matillion jobs look complex but are actually simple
  • On-premises sources may block migration—identify these early

3. Create Fivetran Workspace and Connections

1-2 hours

Sign up for Fivetran Cloud. Create workspace. Set up connections for your data warehouses (Snowflake, BigQuery, Redshift, etc.). Test warehouse connections with sample queries. Configure schema naming conventions if needed.

⚠️ Watch Out For:

  • Warehouse credentials must have schema/table creation permissions—verify this early
  • Network firewall rules must be updated for Fivetran's IP ranges

4. Migrate First Matillion Job

1-2 hours

Select the simplest Matillion job (single source, single target, minimal transformation). Create the equivalent Fivetran connector. Configure table selection and sync mode (full refresh vs. incremental). Test the sync. Compare outputs with the original Matillion run.

⚠️ Watch Out For:

  • Matillion's incremental sync logic may differ from Fivetran's—test thoroughly
  • Column ordering and data types may differ—verify sample rows match

5. Set Up dbt for Transformation

2-4 hours

For jobs with transformation, create dbt models that build on Fivetran-loaded tables. Rewrite Matillion transformations as dbt SQL. Configure dbt to run after Fivetran syncs (via Fivetran webhooks or external orchestrator). Test dbt output.

⚠️ Watch Out For:

  • Matillion's visual job logic requires translation to dbt SQL—may uncover hidden business logic
  • Scheduling dependencies between Fivetran and dbt must be carefully orchestrated

6. Configure Scheduling and Monitoring

1-2 hours

Set up Fivetran sync schedules (hourly, daily, weekly). Map Matillion's schedule to Fivetran's options. Configure alerts for failed syncs (email, Slack, webhooks). Set up monitoring dashboards to track sync success rates and latency.

⚠️ Watch Out For:

  • Fivetran's schedule granularity may differ from Matillion's—adjust expectations
  • Alert thresholds should account for expected variability (weekend vs. weekday traffic)

7. Migrate Remaining Jobs

1-2 hours per job

Progressively migrate remaining Matillion jobs to Fivetran. Start with simple ones (category 1). Move to more complex ones (category 2) once you have confidence. For each job, validate that outputs match the original Matillion run.

⚠️ Watch Out For:

  • Later jobs may have hidden complexity—don't assume smooth sailing after first few
  • Some jobs may require custom connectors or workarounds—plan alternatives early

8. Run Parallel Validation

4-8 hours (over 1-2 weeks)

Keep both Matillion and Fivetran jobs running in parallel for 1-2 full execution cycles. Compare outputs: record counts, data accuracy, timing. Validate that downstream analytics and dashboards produce identical results with Fivetran data.

⚠️ Watch Out For:

  • Timing differences between Matillion and Fivetran can complicate comparison—align schedules temporarily
  • Small data mismatches often stem from NULL handling or data type precision—investigate thoroughly

9. Optimize and Cost Review

1-2 hours

Review Fivetran's consumption costs (MAR—Monthly Active Rows) for the first month. Identify large tables and optimize by adjusting column selection or sync frequency. Configure cost alerts. Update team dashboards and reporting to reflect new load times.

⚠️ Watch Out For:

  • First month of Fivetran costs may be higher than expected if large tables are fully synced—review data volume
  • Some Fivetran sources have per-connector costs regardless of data volume—plan accordingly

10. Cutover and Decommission Matillion

1-2 hours

Once Fivetran passes validation, disable Matillion jobs. Keep Matillion running read-only for 2 weeks for reference. Update documentation and team runbooks to reflect Fivetran-based pipelines. Archive Matillion jobs. Decommission Matillion infrastructure.

⚠️ Watch Out For:

  • Don't delete Matillion jobs immediately—archive for 2 weeks in case rollback is needed
  • Update downstream alerts and SLAs to account for any timing changes in Fivetran schedules

Feature Mapping: Matillion → Fivetran

Matillion Feature Fivetran Equivalent Notes
Matillion Job Fivetran Connector Jobs map almost 1:1 to connectors. Fivetran is simpler and more opinionated about configuration.
Matillion Designer (UI) Fivetran UI + dbt editor Matillion's visual job builder is replaced by Fivetran's connector configuration + dbt for transformation.
Transformation Component dbt models Matillion's built-in transformation moves to dbt. Fivetran is loading-only.
On-demand vs. Scheduled Fivetran sync schedule Both support scheduling. Fivetran's schedule options may be more limited than Matillion's.
Cloud warehouse integration Native Fivetran support Both integrate natively with Snowflake, BigQuery, Redshift. No difference here.
Data quality checks dbt tests Matillion's built-in checks move to dbt tests or external data quality tools.
Scheduling and alerting Fivetran schedule + notifications Fivetran's alerting is simpler than Matillion's—may require orchestration tool for complex workflows.
Licensing Consumption-based (MAR) Matillion: capacity-based. Fivetran: pay-per-row. Costs shift with data volume.

Key Gotchas to Watch

Feature Reduction

⚠️ Fivetran is simpler than Matillion but also less flexible. Some Matillion job features (dynamic file processing, on-premises sources) aren't available in Fivetran.

Mitigation: Be realistic about what Fivetran can do. For unsupported scenarios, keep them in Matillion or use alternative tools. Don't force-fit complex jobs into Fivetran.

Pricing Model Change

⚠️ Matillion's capacity-based pricing is predictable; Fivetran's MAR-based pricing scales with data volume. Costs can surprise if you don't monitor carefully.

Mitigation: Model 12-month costs for both platforms. Optimize Fivetran column selection and sync frequency to manage costs. Set up cost alerts.

Transformation Rewriting

⚠️ Matillion's visual transformation components don't translate directly to dbt. SQL rewriting requires careful attention.

Mitigation: Involve SQL experts in the migration. Write comprehensive dbt tests. Validate outputs thoroughly before production cutover.

Operational Learning

⚠️ Matillion users are accustomed to a visual job designer. Fivetran + dbt is more configuration-driven, which some teams find less intuitive.

Mitigation: Plan team training. Create templates and examples. Assign subject-matter experts to champion dbt adoption.

On-Premises Sources

⚠️ Matillion can be deployed on-premises. Fivetran is cloud-only (with agents for on-prem sources). If you rely on Matillion's on-prem deployment, migration requires new architecture.

Mitigation: For on-premises sources, use Fivetran's on-premises agent or Airbyte's self-hosted option. Evaluate the effort and cost.

Incremental Sync Differences

⚠️ Matillion's incremental logic may differ from Fivetran's cursor-based approach, causing data misalignment.

Mitigation: Test incremental syncs thoroughly with small data samples first. Run full refreshes initially until confident in incremental logic. Document cursor field choices.

Last updated: Jun 17, 2026